Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ift88Q61371 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ift88Q61371 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.73■□□□□ 0.75
Ift88Q61371 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ift88Q61371 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ift88Q61371 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ift88Q61371 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ift88Q61371 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.73■□□□□ 0.75
Ift88Q61371 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ift88Q61371 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Ift88Q61371 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ift88Q61371 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ift88Q61371 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Ift88Q61371 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ift88Q61371 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ift88Q61371 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ift88Q61371 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.72■□□□□ 0.75
Ift88Q61371 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.72■□□□□ 0.75
Ift88Q61371 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.72■□□□□ 0.75
Ift88Q61371 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ift88Q61371 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ift88Q61371 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ift88Q61371 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ift88Q61371 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ift88Q61371 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ift88Q61371 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Ift88Q61371 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.71■□□□□ 0.75
Ift88Q61371 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.71■□□□□ 0.75
Ift88Q61371 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ift88Q61371 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Ift88Q61371 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
Ift88Q61371 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Ift88Q61371 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.7■□□□□ 0.74
Ift88Q61371 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ift88Q61371 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ift88Q61371 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.69■□□□□ 0.74
Ift88Q61371 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.69■□□□□ 0.74
Ift88Q61371 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.69■□□□□ 0.74
Ift88Q61371 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ift88Q61371 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ift88Q61371 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ift88Q61371 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.68■□□□□ 0.74
Ift88Q61371 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Gm10033-202ENSMUST00000211874 928 ntBASIC19.68■□□□□ 0.74
Ift88Q61371 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms