Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rc3h1Q4VGL6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Gm13401-201ENSMUST00000117074 291 ntBASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Gm13836-201ENSMUST00000121159 501 ntBASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Gm30025-201ENSMUST00000218555 728 ntBASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Gm9987-201ENSMUST00000069768 567 ntBASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rc3h1Q4VGL6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 Gm12085-201ENSMUST00000119263 940 ntBASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rc3h1Q4VGL6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rc3h1Q4VGL6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Gm11539-201ENSMUST00000119837 557 ntBASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Gm13436-201ENSMUST00000120418 567 ntBASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.58■□□□□ 0.89
Rc3h1Q4VGL6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rc3h1Q4VGL6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rc3h1Q4VGL6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rc3h1Q4VGL6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rc3h1Q4VGL6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rc3h1Q4VGL6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms