Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Syne3Q4FZC9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Gm44549-201ENSMUST00000208351 577 ntBASIC18.9■□□□□ 0.62
Syne3Q4FZC9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne3Q4FZC9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne3Q4FZC9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Syne3Q4FZC9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne3Q4FZC9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.89■□□□□ 0.61
Syne3Q4FZC9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.89■□□□□ 0.61
Syne3Q4FZC9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne3Q4FZC9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Syne3Q4FZC9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne3Q4FZC9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Fst-202ENSMUST00000223640 2612 ntBASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne3Q4FZC9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne3Q4FZC9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne3Q4FZC9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.86■□□□□ 0.61
Syne3Q4FZC9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syne3Q4FZC9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms