Protein–RNA interactions for Protein: Q3UYV9

Ncbp1, Nuclear cap-binding protein subunit 1, mousemouse

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp1Q3UYV9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ncbp1Q3UYV9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Mir6349-201ENSMUST00000184059 97 ntBASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ncbp1Q3UYV9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ncbp1Q3UYV9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Gm715-201ENSMUST00000117865 831 ntBASIC21.28■■□□□ 1
Ncbp1Q3UYV9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ncbp1Q3UYV9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ncbp1Q3UYV9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ncbp1Q3UYV9 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.27■□□□□ 0.99
Ncbp1Q3UYV9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ncbp1Q3UYV9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Gm18025-201ENSMUST00000221733 862 ntBASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ncbp1Q3UYV9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms