Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf44Q3UHJ8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf44Q3UHJ8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Gm10138-203ENSMUST00000206952 366 ntBASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rnf44Q3UHJ8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Gm5643-201ENSMUST00000117081 966 ntBASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf44Q3UHJ8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf44Q3UHJ8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Gm13168-201ENSMUST00000121771 632 ntBASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Mir2861-201ENSMUST00000175539 82 ntBASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Fst-202ENSMUST00000223640 2612 ntBASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf44Q3UHJ8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Gm15375-201ENSMUST00000119510 849 ntBASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Gm8520-201ENSMUST00000186517 868 ntBASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf44Q3UHJ8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Mir6349-201ENSMUST00000184059 97 ntBASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf44Q3UHJ8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.17■□□□□ 0.34
Rnf44Q3UHJ8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf44Q3UHJ8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf44Q3UHJ8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf44Q3UHJ8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf44Q3UHJ8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.17■□□□□ 0.34
Rnf44Q3UHJ8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf44Q3UHJ8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.17■□□□□ 0.34
Rnf44Q3UHJ8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf44Q3UHJ8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms