Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Q3KNL4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.53■□□□□ 0.4
Q3KNL4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Gm22325-201ENSMUST00000158904 308 ntBASIC17.53■□□□□ 0.4
Q3KNL4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.53■□□□□ 0.4
Q3KNL4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.53■□□□□ 0.4
Q3KNL4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q3KNL4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q3KNL4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3KNL4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3KNL4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3KNL4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q3KNL4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Q3KNL4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.52■□□□□ 0.4
Q3KNL4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3KNL4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3KNL4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q3KNL4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Q3KNL4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Q3KNL4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q3KNL4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q3KNL4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q3KNL4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q3KNL4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q3KNL4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q3KNL4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.51■□□□□ 0.39
Q3KNL4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Q3KNL4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.51■□□□□ 0.39
Q3KNL4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.51■□□□□ 0.39
Q3KNL4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.51■□□□□ 0.39
Q3KNL4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Q3KNL4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.51■□□□□ 0.39
Q3KNL4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Q3KNL4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Q3KNL4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q3KNL4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Q3KNL4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Gm42642-201ENSMUST00000200683 355 ntBASIC17.5■□□□□ 0.39
Q3KNL4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Q3KNL4 Gm10033-202ENSMUST00000211874 928 ntBASIC17.5■□□□□ 0.39
Q3KNL4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Q3KNL4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Q3KNL4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q3KNL4 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.5■□□□□ 0.39
Q3KNL4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Q3KNL4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.49■□□□□ 0.39
Q3KNL4 Gm5874-201ENSMUST00000096101 508 ntBASIC17.49■□□□□ 0.39
Q3KNL4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.49■□□□□ 0.39
Q3KNL4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3KNL4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Q3KNL4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q3KNL4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms