Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Gm10653-202ENSMUST00000139570 835 ntBASIC13.79□□□□□ -0.2
Cdx4Q07424 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdx4Q07424 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cdx4Q07424 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Cdx4Q07424 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdx4Q07424 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Cdx4Q07424 Gm8520-201ENSMUST00000186517 868 ntBASIC13.78□□□□□ -0.2
Cdx4Q07424 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdx4Q07424 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.78□□□□□ -0.2
Cdx4Q07424 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.78□□□□□ -0.2
Cdx4Q07424 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.78□□□□□ -0.2
Cdx4Q07424 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdx4Q07424 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx4Q07424 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cdx4Q07424 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdx4Q07424 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdx4Q07424 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdx4Q07424 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdx4Q07424 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cdx4Q07424 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cdx4Q07424 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdx4Q07424 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdx4Q07424 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.77□□□□□ -0.21
Cdx4Q07424 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.77□□□□□ -0.21
Cdx4Q07424 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx4Q07424 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdx4Q07424 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdx4Q07424 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
Cdx4Q07424 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.76□□□□□ -0.21
Cdx4Q07424 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Rab3c-203ENSMUST00000224180 967 ntBASIC13.76□□□□□ -0.21
Cdx4Q07424 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.76□□□□□ -0.21
Cdx4Q07424 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdx4Q07424 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx4Q07424 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdx4Q07424 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx4Q07424 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx4Q07424 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx4Q07424 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdx4Q07424 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx4Q07424 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Cdx4Q07424 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx4Q07424 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx4Q07424 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx4Q07424 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx4Q07424 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.75□□□□□ -0.21
Cdx4Q07424 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx4Q07424 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.75□□□□□ -0.21
Cdx4Q07424 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms