Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm10138-203ENSMUST00000206952 366 ntBASIC19.39■□□□□ 0.69
Trim43cP86449 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim43cP86449 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43cP86449 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.39■□□□□ 0.69
Trim43cP86449 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trim43cP86449 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43cP86449 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43cP86449 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43cP86449 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim43cP86449 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim43cP86449 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43cP86449 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim43cP86449 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trim43cP86449 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.37■□□□□ 0.69
Trim43cP86449 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.37■□□□□ 0.69
Trim43cP86449 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim43cP86449 Gm10653-202ENSMUST00000139570 835 ntBASIC19.37■□□□□ 0.69
Trim43cP86449 Mir6349-201ENSMUST00000184059 97 ntBASIC19.37■□□□□ 0.69
Trim43cP86449 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.37■□□□□ 0.69
Trim43cP86449 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim43cP86449 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Trim43cP86449 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43cP86449 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Gm15375-201ENSMUST00000119510 849 ntBASIC19.36■□□□□ 0.69
Trim43cP86449 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim43cP86449 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43cP86449 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.35■□□□□ 0.69
Trim43cP86449 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim43cP86449 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.35■□□□□ 0.69
Trim43cP86449 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim43cP86449 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43cP86449 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim43cP86449 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43cP86449 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim43cP86449 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43cP86449 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43cP86449 Gm13158-201ENSMUST00000122007 736 ntBASIC19.34■□□□□ 0.69
Trim43cP86449 Trmt13-210ENSMUST00000198454 880 ntBASIC19.34■□□□□ 0.69
Trim43cP86449 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43cP86449 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.34■□□□□ 0.69
Trim43cP86449 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim43cP86449 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43cP86449 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim43cP86449 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.33■□□□□ 0.69
Trim43cP86449 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43cP86449 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43cP86449 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43cP86449 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43cP86449 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43cP86449 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Trim43cP86449 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43cP86449 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim43cP86449 Gm5643-201ENSMUST00000117081 966 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms