Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SgcbP82349 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SgcbP82349 Gm5643-201ENSMUST00000117081 966 ntBASIC15.91■□□□□ 0.14
SgcbP82349 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.91■□□□□ 0.14
SgcbP82349 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
SgcbP82349 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SgcbP82349 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SgcbP82349 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SgcbP82349 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.91■□□□□ 0.14
SgcbP82349 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SgcbP82349 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SgcbP82349 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SgcbP82349 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SgcbP82349 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SgcbP82349 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.9■□□□□ 0.14
SgcbP82349 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SgcbP82349 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SgcbP82349 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.9■□□□□ 0.14
SgcbP82349 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SgcbP82349 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.9■□□□□ 0.14
SgcbP82349 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SgcbP82349 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SgcbP82349 Gm10812-201ENSMUST00000099864 546 ntBASIC15.9■□□□□ 0.14
SgcbP82349 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.9■□□□□ 0.14
SgcbP82349 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SgcbP82349 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SgcbP82349 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SgcbP82349 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.89■□□□□ 0.13
SgcbP82349 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SgcbP82349 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.89■□□□□ 0.13
SgcbP82349 Gm10138-203ENSMUST00000206952 366 ntBASIC15.89■□□□□ 0.13
SgcbP82349 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.89■□□□□ 0.13
SgcbP82349 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
SgcbP82349 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SgcbP82349 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.88■□□□□ 0.13
SgcbP82349 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SgcbP82349 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.88■□□□□ 0.13
SgcbP82349 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.88■□□□□ 0.13
SgcbP82349 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.88■□□□□ 0.13
SgcbP82349 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SgcbP82349 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SgcbP82349 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SgcbP82349 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SgcbP82349 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.87■□□□□ 0.13
SgcbP82349 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SgcbP82349 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.87■□□□□ 0.13
SgcbP82349 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.87■□□□□ 0.13
SgcbP82349 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SgcbP82349 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SgcbP82349 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SgcbP82349 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.87■□□□□ 0.13
SgcbP82349 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SgcbP82349 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SgcbP82349 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SgcbP82349 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms