Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Slc6a1P31648 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.33■□□□□ 0.05
Slc6a1P31648 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Slc6a1P31648 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a1P31648 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a1P31648 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a1P31648 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.33■□□□□ 0.05
Slc6a1P31648 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Slc6a1P31648 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.33■□□□□ 0.04
Slc6a1P31648 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Slc6a1P31648 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a1P31648 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc6a1P31648 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc6a1P31648 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.32■□□□□ 0.04
Slc6a1P31648 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Gm43060-201ENSMUST00000200621 289 ntBASIC15.32■□□□□ 0.04
Slc6a1P31648 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.32■□□□□ 0.04
Slc6a1P31648 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc6a1P31648 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a1P31648 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a1P31648 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a1P31648 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.31■□□□□ 0.04
Slc6a1P31648 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a1P31648 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a1P31648 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.31■□□□□ 0.04
Slc6a1P31648 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc6a1P31648 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a1P31648 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a1P31648 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a1P31648 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a1P31648 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a1P31648 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a1P31648 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a1P31648 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a1P31648 Tgds-204ENSMUST00000228543 1594 ntBASIC15.3■□□□□ 0.04
Slc6a1P31648 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a1P31648 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.3■□□□□ 0.04
Slc6a1P31648 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a1P31648 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a1P31648 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a1P31648 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a1P31648 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a1P31648 Smad6-203ENSMUST00000179458 273 ntBASIC15.29■□□□□ 0.04
Slc6a1P31648 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc6a1P31648 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a1P31648 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc6a1P31648 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a1P31648 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms