Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh3P13705 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.64■□□□□ 0.74
Msh3P13705 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Msh3P13705 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.64■□□□□ 0.73
Msh3P13705 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh3P13705 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.64■□□□□ 0.73
Msh3P13705 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh3P13705 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh3P13705 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh3P13705 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh3P13705 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.64■□□□□ 0.73
Msh3P13705 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh3P13705 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.64■□□□□ 0.73
Msh3P13705 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh3P13705 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.63■□□□□ 0.73
Msh3P13705 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.63■□□□□ 0.73
Msh3P13705 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.63■□□□□ 0.73
Msh3P13705 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh3P13705 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh3P13705 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh3P13705 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Msh3P13705 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.62■□□□□ 0.73
Msh3P13705 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.62■□□□□ 0.73
Msh3P13705 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh3P13705 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Msh3P13705 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Msh3P13705 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh3P13705 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.61■□□□□ 0.73
Msh3P13705 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh3P13705 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh3P13705 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Msh3P13705 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh3P13705 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.61■□□□□ 0.73
Msh3P13705 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh3P13705 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.61■□□□□ 0.73
Msh3P13705 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Gm29257-201ENSMUST00000186115 639 ntBASIC19.6■□□□□ 0.73
Msh3P13705 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh3P13705 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.59■□□□□ 0.73
Msh3P13705 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Msh3P13705 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.59■□□□□ 0.73
Msh3P13705 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh3P13705 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.58■□□□□ 0.73
Msh3P13705 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh3P13705 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh3P13705 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh3P13705 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.58■□□□□ 0.73
Msh3P13705 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh3P13705 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh3P13705 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Msh3P13705 Trmt13-210ENSMUST00000198454 880 ntBASIC19.58■□□□□ 0.72
Msh3P13705 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Msh3P13705 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Msh3P13705 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Msh3P13705 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Msh3P13705 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Msh3P13705 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Msh3P13705 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Msh3P13705 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh3P13705 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh3P13705 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.57■□□□□ 0.72
Msh3P13705 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.57■□□□□ 0.72
Msh3P13705 Gm18025-201ENSMUST00000221733 862 ntBASIC19.57■□□□□ 0.72
Msh3P13705 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms