Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl1P12850 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl1P12850 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.8□□□□□ -0.04
Cxcl1P12850 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl1P12850 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl1P12850 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl1P12850 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl1P12850 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl1P12850 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcl1P12850 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cxcl1P12850 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Cxcl1P12850 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cxcl1P12850 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.79□□□□□ -0.04
Cxcl1P12850 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cxcl1P12850 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.79□□□□□ -0.04
Cxcl1P12850 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Cxcl1P12850 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.79□□□□□ -0.04
Cxcl1P12850 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.79□□□□□ -0.04
Cxcl1P12850 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cxcl1P12850 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cxcl1P12850 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cxcl1P12850 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.78□□□□□ -0.04
Cxcl1P12850 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cxcl1P12850 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cxcl1P12850 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cxcl1P12850 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cxcl1P12850 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.78□□□□□ -0.04
Cxcl1P12850 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.78□□□□□ -0.04
Cxcl1P12850 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.78□□□□□ -0.04
Cxcl1P12850 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cxcl1P12850 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl1P12850 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.77□□□□□ -0.04
Cxcl1P12850 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.77□□□□□ -0.04
Cxcl1P12850 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.77□□□□□ -0.04
Cxcl1P12850 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cxcl1P12850 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cxcl1P12850 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl1P12850 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl1P12850 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cxcl1P12850 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cxcl1P12850 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Cxcl1P12850 Gm13234-201ENSMUST00000120010 747 ntBASIC14.77□□□□□ -0.05
Cxcl1P12850 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.77□□□□□ -0.05
Cxcl1P12850 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl1P12850 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cxcl1P12850 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Cxcl1P12850 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl1P12850 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cxcl1P12850 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl1P12850 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl1P12850 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl1P12850 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.77□□□□□ -0.05
Cxcl1P12850 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl1P12850 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl1P12850 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl1P12850 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.76□□□□□ -0.05
Cxcl1P12850 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
Cxcl1P12850 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cxcl1P12850 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl1P12850 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl1P12850 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl1P12850 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms