Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ApoeP08226 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ApoeP08226 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ApoeP08226 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ApoeP08226 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
ApoeP08226 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Idnk-204ENSMUST00000226010 1898 ntBASIC16.89■□□□□ 0.29
ApoeP08226 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.89■□□□□ 0.29
ApoeP08226 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
ApoeP08226 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ApoeP08226 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ApoeP08226 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ApoeP08226 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Gm13146-201ENSMUST00000118508 780 ntBASIC16.88■□□□□ 0.29
ApoeP08226 Gm22325-201ENSMUST00000158904 308 ntBASIC16.88■□□□□ 0.29
ApoeP08226 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ApoeP08226 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ApoeP08226 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.87■□□□□ 0.29
ApoeP08226 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.87■□□□□ 0.29
ApoeP08226 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ApoeP08226 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ApoeP08226 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ApoeP08226 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.87■□□□□ 0.29
ApoeP08226 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ApoeP08226 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.87■□□□□ 0.29
ApoeP08226 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ApoeP08226 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ApoeP08226 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ApoeP08226 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
ApoeP08226 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ApoeP08226 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ApoeP08226 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ApoeP08226 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ApoeP08226 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Gm13534-201ENSMUST00000121169 513 ntBASIC16.86■□□□□ 0.29
ApoeP08226 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.86■□□□□ 0.29
ApoeP08226 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.86■□□□□ 0.29
ApoeP08226 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ApoeP08226 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.86■□□□□ 0.29
ApoeP08226 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.86■□□□□ 0.29
ApoeP08226 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ApoeP08226 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ApoeP08226 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ApoeP08226 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.85■□□□□ 0.29
ApoeP08226 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ApoeP08226 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.85■□□□□ 0.29
ApoeP08226 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ApoeP08226 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ApoeP08226 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.85■□□□□ 0.29
ApoeP08226 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ApoeP08226 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ApoeP08226 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ApoeP08226 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ApoeP08226 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms