Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
P06320 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC11.3□□□□□ -0.6
P06320 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.3□□□□□ -0.6
P06320 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Zcchc6-207ENSMUST00000225576 2499 ntBASIC11.3□□□□□ -0.6
P06320 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.3□□□□□ -0.6
P06320 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06320 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC11.29□□□□□ -0.6
P06320 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P06320 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P06320 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.29□□□□□ -0.6
P06320 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.29□□□□□ -0.6
P06320 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC11.29□□□□□ -0.6
P06320 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
P06320 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06320 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.28□□□□□ -0.6
P06320 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.28□□□□□ -0.6
P06320 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
P06320 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.28□□□□□ -0.6
P06320 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
P06320 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06320 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P06320 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC11.27□□□□□ -0.6
P06320 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06320 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06320 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
P06320 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.27□□□□□ -0.61
P06320 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
P06320 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
P06320 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
P06320 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
P06320 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06320 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06320 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms