Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Hoxa3P02831 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hoxa3P02831 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Hoxa3P02831 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.92□□□□□ -0.02
Hoxa3P02831 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.92□□□□□ -0.02
Hoxa3P02831 Mir6982-201ENSMUST00000184354 68 ntBASIC14.92□□□□□ -0.02
Hoxa3P02831 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.92□□□□□ -0.02
Hoxa3P02831 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hoxa3P02831 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.92□□□□□ -0.02
Hoxa3P02831 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.91□□□□□ -0.02
Hoxa3P02831 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.91□□□□□ -0.02
Hoxa3P02831 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.91□□□□□ -0.02
Hoxa3P02831 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.91□□□□□ -0.02
Hoxa3P02831 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.91□□□□□ -0.02
Hoxa3P02831 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.91□□□□□ -0.02
Hoxa3P02831 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Hoxa3P02831 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hoxa3P02831 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hoxa3P02831 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hoxa3P02831 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.9□□□□□ -0.02
Hoxa3P02831 Gm6576-201ENSMUST00000169678 883 ntBASIC14.9□□□□□ -0.02
Hoxa3P02831 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.9□□□□□ -0.02
Hoxa3P02831 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.9□□□□□ -0.02
Hoxa3P02831 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.9□□□□□ -0.02
Hoxa3P02831 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hoxa3P02831 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.9□□□□□ -0.02
Hoxa3P02831 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hoxa3P02831 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxa3P02831 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxa3P02831 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxa3P02831 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxa3P02831 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.89□□□□□ -0.03
Hoxa3P02831 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 BC021767-201ENSMUST00000126387 1716 ntBASIC14.89□□□□□ -0.03
Hoxa3P02831 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hoxa3P02831 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.89□□□□□ -0.03
Hoxa3P02831 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.89□□□□□ -0.03
Hoxa3P02831 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hoxa3P02831 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms