Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
Ubr1O70481 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ubr1O70481 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ubr1O70481 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ubr1O70481 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Ubr1O70481 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ubr1O70481 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ubr1O70481 Gm17661-201ENSMUST00000170317 270 ntBASIC23.27■■□□□ 1.32
Ubr1O70481 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC23.27■■□□□ 1.32
Ubr1O70481 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ubr1O70481 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ubr1O70481 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ubr1O70481 Gm7284-201ENSMUST00000131667 944 ntBASIC23.27■■□□□ 1.32
Ubr1O70481 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC23.27■■□□□ 1.32
Ubr1O70481 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Ubr1O70481 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ubr1O70481 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC23.26■■□□□ 1.31
Ubr1O70481 Mir8112-201ENSMUST00000184382 131 ntBASIC23.26■■□□□ 1.31
Ubr1O70481 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC23.26■■□□□ 1.31
Ubr1O70481 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ubr1O70481 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ubr1O70481 Gm27741-201ENSMUST00000185060 237 ntBASIC23.25■■□□□ 1.31
Ubr1O70481 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC23.25■■□□□ 1.31
Ubr1O70481 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ubr1O70481 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ubr1O70481 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ubr1O70481 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ubr1O70481 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ubr1O70481 Spsb2-203ENSMUST00000112473 1322 ntBASIC23.25■■□□□ 1.31
Ubr1O70481 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubr1O70481 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubr1O70481 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC23.24■■□□□ 1.31
Ubr1O70481 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubr1O70481 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubr1O70481 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ubr1O70481 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubr1O70481 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubr1O70481 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ubr1O70481 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubr1O70481 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubr1O70481 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
Ubr1O70481 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Ubr1O70481 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubr1O70481 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr1O70481 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC23.22■■□□□ 1.31
Ubr1O70481 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr1O70481 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC23.22■■□□□ 1.31
Ubr1O70481 Gm17971-201ENSMUST00000190239 806 ntBASIC23.22■■□□□ 1.31
Ubr1O70481 Gm5587-201ENSMUST00000206270 674 ntBASIC23.22■■□□□ 1.31
Ubr1O70481 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
Ubr1O70481 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr1O70481 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Ubr1O70481 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
Ubr1O70481 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC23.22■■□□□ 1.31
Ubr1O70481 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC23.22■■□□□ 1.31
Ubr1O70481 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr1O70481 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr1O70481 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr1O70481 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr1O70481 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ubr1O70481 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC23.22■■□□□ 1.31
Ubr1O70481 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ubr1O70481 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ubr1O70481 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ubr1O70481 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Ubr1O70481 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.31
Ubr1O70481 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC23.2■■□□□ 1.3
Ubr1O70481 Gm13474-201ENSMUST00000122466 815 ntBASIC23.2■■□□□ 1.3
Ubr1O70481 Gm9013-201ENSMUST00000132939 882 ntBASIC23.2■■□□□ 1.3
Ubr1O70481 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC23.2■■□□□ 1.3
Ubr1O70481 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ubr1O70481 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ubr1O70481 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ubr1O70481 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ubr1O70481 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ubr1O70481 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Ubr1O70481 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC23.19■■□□□ 1.3
Ubr1O70481 Gm3272-201ENSMUST00000181181 1229 ntBASIC23.19■■□□□ 1.3
Ubr1O70481 Gm10566-201ENSMUST00000086739 996 ntBASIC23.19■■□□□ 1.3
Ubr1O70481 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr1O70481 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr1O70481 Idnk-204ENSMUST00000226010 1898 ntBASIC23.19■■□□□ 1.3
Ubr1O70481 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr1O70481 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr1O70481 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr1O70481 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC23.19■■□□□ 1.3
Ubr1O70481 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ubr1O70481 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ubr1O70481 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms