Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.84■□□□□ 0.61
Pja1O55176 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pja1O55176 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Pja1O55176 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.84■□□□□ 0.61
Pja1O55176 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pja1O55176 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pja1O55176 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pja1O55176 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pja1O55176 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.83■□□□□ 0.61
Pja1O55176 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pja1O55176 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pja1O55176 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pja1O55176 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pja1O55176 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.83■□□□□ 0.6
Pja1O55176 Gm7514-201ENSMUST00000209475 934 ntBASIC18.83■□□□□ 0.6
Pja1O55176 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pja1O55176 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pja1O55176 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pja1O55176 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pja1O55176 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pja1O55176 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pja1O55176 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.82■□□□□ 0.6
Pja1O55176 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.82■□□□□ 0.6
Pja1O55176 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.82■□□□□ 0.6
Pja1O55176 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.82■□□□□ 0.6
Pja1O55176 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Pja1O55176 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.82■□□□□ 0.6
Pja1O55176 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.82■□□□□ 0.6
Pja1O55176 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.82■□□□□ 0.6
Pja1O55176 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Pja1O55176 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pja1O55176 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Pja1O55176 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja1O55176 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja1O55176 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.81■□□□□ 0.6
Pja1O55176 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pja1O55176 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja1O55176 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pja1O55176 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja1O55176 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pja1O55176 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.81■□□□□ 0.6
Pja1O55176 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pja1O55176 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pja1O55176 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.8■□□□□ 0.6
Pja1O55176 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pja1O55176 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.8■□□□□ 0.6
Pja1O55176 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.8■□□□□ 0.6
Pja1O55176 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pja1O55176 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja1O55176 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja1O55176 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pja1O55176 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja1O55176 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pja1O55176 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pja1O55176 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pja1O55176 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.79■□□□□ 0.6
Pja1O55176 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms