Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hps1O08983 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hps1O08983 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hps1O08983 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hps1O08983 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hps1O08983 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hps1O08983 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.52■□□□□ 0.24
Hps1O08983 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hps1O08983 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hps1O08983 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hps1O08983 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hps1O08983 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hps1O08983 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hps1O08983 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.52■□□□□ 0.24
Hps1O08983 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.52■□□□□ 0.24
Hps1O08983 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.52■□□□□ 0.24
Hps1O08983 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hps1O08983 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hps1O08983 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hps1O08983 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hps1O08983 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Hps1O08983 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hps1O08983 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hps1O08983 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hps1O08983 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hps1O08983 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.51■□□□□ 0.23
Hps1O08983 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Hps1O08983 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hps1O08983 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hps1O08983 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.51■□□□□ 0.23
Hps1O08983 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Fst-202ENSMUST00000223640 2612 ntBASIC16.51■□□□□ 0.23
Hps1O08983 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.51■□□□□ 0.23
Hps1O08983 Reep4-203ENSMUST00000226563 1444 ntBASIC16.51■□□□□ 0.23
Hps1O08983 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.51■□□□□ 0.23
Hps1O08983 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hps1O08983 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Gm10653-202ENSMUST00000139570 835 ntBASIC16.5■□□□□ 0.23
Hps1O08983 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hps1O08983 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.5■□□□□ 0.23
Hps1O08983 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hps1O08983 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hps1O08983 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hps1O08983 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hps1O08983 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hps1O08983 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hps1O08983 Gm7860-201ENSMUST00000121190 879 ntBASIC16.49■□□□□ 0.23
Hps1O08983 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Hps1O08983 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.49■□□□□ 0.23
Hps1O08983 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.49■□□□□ 0.23
Hps1O08983 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hps1O08983 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hps1O08983 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hps1O08983 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hps1O08983 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hps1O08983 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Hps1O08983 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Gm8520-201ENSMUST00000186517 868 ntBASIC16.48■□□□□ 0.23
Hps1O08983 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.48■□□□□ 0.23
Hps1O08983 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.48■□□□□ 0.23
Hps1O08983 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.48■□□□□ 0.23
Hps1O08983 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hps1O08983 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hps1O08983 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.47■□□□□ 0.23
Hps1O08983 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms