Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.2■□□□□ 0.66
Chrna9G3X8Z7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Gm11927-201ENSMUST00000118472 759 ntBASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Mir8112-201ENSMUST00000184382 131 ntBASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna9G3X8Z7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Flg-201ENSMUST00000050758 1488 ntBASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Gm29791-202ENSMUST00000207888 369 ntBASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna9G3X8Z7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna9G3X8Z7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Mtag2-201ENSMUST00000058665 714 ntBASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna9G3X8Z7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna9G3X8Z7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna9G3X8Z7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna9G3X8Z7 Gm12933-201ENSMUST00000120203 872 ntBASIC19.15■□□□□ 0.66
Chrna9G3X8Z7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.15■□□□□ 0.66
Chrna9G3X8Z7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna9G3X8Z7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.15■□□□□ 0.66
Chrna9G3X8Z7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna9G3X8Z7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.14■□□□□ 0.65
Chrna9G3X8Z7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chrna9G3X8Z7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna9G3X8Z7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.13■□□□□ 0.65
Chrna9G3X8Z7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna9G3X8Z7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna9G3X8Z7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chrna9G3X8Z7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna9G3X8Z7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chrna9G3X8Z7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms