Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TprF6ZDS4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TprF6ZDS4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TprF6ZDS4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TprF6ZDS4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TprF6ZDS4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.33■□□□□ 0.2
TprF6ZDS4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TprF6ZDS4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TprF6ZDS4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.33■□□□□ 0.2
TprF6ZDS4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.33■□□□□ 0.2
TprF6ZDS4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TprF6ZDS4 Gm38285-201ENSMUST00000192928 922 ntBASIC16.33■□□□□ 0.2
TprF6ZDS4 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.33■□□□□ 0.2
TprF6ZDS4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.33■□□□□ 0.2
TprF6ZDS4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TprF6ZDS4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TprF6ZDS4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.32■□□□□ 0.2
TprF6ZDS4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TprF6ZDS4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TprF6ZDS4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Notumos-201ENSMUST00000151998 2659 ntBASIC16.32■□□□□ 0.2
TprF6ZDS4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TprF6ZDS4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
TprF6ZDS4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TprF6ZDS4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TprF6ZDS4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TprF6ZDS4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.31■□□□□ 0.2
TprF6ZDS4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.31■□□□□ 0.2
TprF6ZDS4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.31■□□□□ 0.2
TprF6ZDS4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Gm8587-201ENSMUST00000076538 843 ntBASIC16.31■□□□□ 0.2
TprF6ZDS4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TprF6ZDS4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Gm27704-201ENSMUST00000185094 107 ntBASIC16.31■□□□□ 0.2
TprF6ZDS4 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.31■□□□□ 0.2
TprF6ZDS4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.31■□□□□ 0.2
TprF6ZDS4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TprF6ZDS4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.3■□□□□ 0.2
TprF6ZDS4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.3■□□□□ 0.2
TprF6ZDS4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TprF6ZDS4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.29■□□□□ 0.2
TprF6ZDS4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TprF6ZDS4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TprF6ZDS4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.29■□□□□ 0.2
TprF6ZDS4 Gm27463-201ENSMUST00000183569 57 ntBASIC16.29■□□□□ 0.2
TprF6ZDS4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.29■□□□□ 0.2
TprF6ZDS4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.29■□□□□ 0.2
TprF6ZDS4 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.29■□□□□ 0.2
TprF6ZDS4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TprF6ZDS4 Golph3-205ENSMUST00000228671 2842 ntBASIC16.29■□□□□ 0.2
TprF6ZDS4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TprF6ZDS4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TprF6ZDS4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms