Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.93■□□□□ 0.14
Shank1D3YZU1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Gm27704-201ENSMUST00000185094 107 ntBASIC15.93■□□□□ 0.14
Shank1D3YZU1 Gm17807-201ENSMUST00000186869 298 ntBASIC15.93■□□□□ 0.14
Shank1D3YZU1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shank1D3YZU1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Gm9013-201ENSMUST00000132939 882 ntBASIC15.92■□□□□ 0.14
Shank1D3YZU1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.92■□□□□ 0.14
Shank1D3YZU1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Shank1D3YZU1 Gm16061-201ENSMUST00000122167 857 ntBASIC15.92■□□□□ 0.14
Shank1D3YZU1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Gm44771-201ENSMUST00000206975 626 ntBASIC15.91■□□□□ 0.14
Shank1D3YZU1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Shank1D3YZU1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.9■□□□□ 0.14
Shank1D3YZU1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shank1D3YZU1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.89■□□□□ 0.13
Shank1D3YZU1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Mir5130-201ENSMUST00000175160 84 ntBASIC15.89■□□□□ 0.13
Shank1D3YZU1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shank1D3YZU1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shank1D3YZU1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms