Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim30cD3YVI9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim30cD3YVI9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim30cD3YVI9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim30cD3YVI9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim30cD3YVI9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim30cD3YVI9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim30cD3YVI9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Gm13148-201ENSMUST00000118892 745 ntBASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim30cD3YVI9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim30cD3YVI9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms