Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Ubr4A2AN08 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Ubr4A2AN08 Gm1818-201ENSMUST00000169406 1184 ntBASIC9.46□□□□□ -0.89
Ubr4A2AN08 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.46□□□□□ -0.89
Ubr4A2AN08 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ubr4A2AN08 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ubr4A2AN08 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ubr4A2AN08 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ubr4A2AN08 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ubr4A2AN08 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ubr4A2AN08 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.46□□□□□ -0.9
Ubr4A2AN08 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ubr4A2AN08 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ubr4A2AN08 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC9.46□□□□□ -0.9
Ubr4A2AN08 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ubr4A2AN08 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ubr4A2AN08 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ubr4A2AN08 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC9.46□□□□□ -0.9
Ubr4A2AN08 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.46□□□□□ -0.9
Ubr4A2AN08 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC9.45□□□□□ -0.9
Ubr4A2AN08 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC9.45□□□□□ -0.9
Ubr4A2AN08 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Mir2861-201ENSMUST00000175539 82 ntBASIC9.45□□□□□ -0.9
Ubr4A2AN08 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ubr4A2AN08 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Gm7935-201ENSMUST00000100555 1278 ntBASIC9.44□□□□□ -0.9
Ubr4A2AN08 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC9.44□□□□□ -0.9
Ubr4A2AN08 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC9.44□□□□□ -0.9
Ubr4A2AN08 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Gm13312-201ENSMUST00000119631 718 ntBASIC9.44□□□□□ -0.9
Ubr4A2AN08 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Gm37722-201ENSMUST00000193757 208 ntBASIC9.44□□□□□ -0.9
Ubr4A2AN08 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ubr4A2AN08 Gm5540-201ENSMUST00000131852 1848 ntBASIC9.44□□□□□ -0.9
Ubr4A2AN08 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Gm11355-201ENSMUST00000121120 306 ntBASIC9.43□□□□□ -0.9
Ubr4A2AN08 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.43□□□□□ -0.9
Ubr4A2AN08 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC9.43□□□□□ -0.9
Ubr4A2AN08 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.43□□□□□ -0.9
Ubr4A2AN08 Mir6956-201ENSMUST00000183598 62 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms