Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.36■□□□□ 0.85
Ccdc112A0AUP1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc112A0AUP1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc112A0AUP1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc112A0AUP1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.36■□□□□ 0.85
Ccdc112A0AUP1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc112A0AUP1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Gm5874-201ENSMUST00000096101 508 ntBASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc112A0AUP1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc112A0AUP1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc112A0AUP1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.33■□□□□ 0.85
Ccdc112A0AUP1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc112A0AUP1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.33■□□□□ 0.85
Ccdc112A0AUP1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc112A0AUP1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc112A0AUP1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.33■□□□□ 0.85
Ccdc112A0AUP1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc112A0AUP1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.33■□□□□ 0.85
Ccdc112A0AUP1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc112A0AUP1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc112A0AUP1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc112A0AUP1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc112A0AUP1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc112A0AUP1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc112A0AUP1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc112A0AUP1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc112A0AUP1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Gm6365-201ENSMUST00000054711 744 ntBASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc112A0AUP1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms