Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Smim17A0A504 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.19■□□□□ 0.18
Smim17A0A504 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smim17A0A504 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Smim17A0A504 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Tgds-204ENSMUST00000228543 1594 ntBASIC16.18■□□□□ 0.18
Smim17A0A504 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.18■□□□□ 0.18
Smim17A0A504 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Smim17A0A504 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Smim17A0A504 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smim17A0A504 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Smim17A0A504 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.17■□□□□ 0.18
Smim17A0A504 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.17■□□□□ 0.18
Smim17A0A504 Gm15820-201ENSMUST00000201566 728 ntBASIC16.17■□□□□ 0.18
Smim17A0A504 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.17■□□□□ 0.18
Smim17A0A504 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smim17A0A504 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.17■□□□□ 0.18
Smim17A0A504 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smim17A0A504 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smim17A0A504 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim17A0A504 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim17A0A504 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smim17A0A504 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.16■□□□□ 0.18
Smim17A0A504 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smim17A0A504 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Smim17A0A504 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim17A0A504 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim17A0A504 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smim17A0A504 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim17A0A504 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Smim17A0A504 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim17A0A504 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim17A0A504 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim17A0A504 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Smim17A0A504 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.15■□□□□ 0.18
Smim17A0A504 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.15■□□□□ 0.18
Smim17A0A504 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Smim17A0A504 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smim17A0A504 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smim17A0A504 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim17A0A504 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smim17A0A504 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim17A0A504 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim17A0A504 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms