Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-2A0A0G2JF93 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-2A0A0G2JF93 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms