Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gm12085-201ENSMUST00000119263 940 ntBASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Mir7071-201ENSMUST00000184847 69 ntBASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm38027-201ENSMUST00000192315 235 ntBASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Igkv5-43A0A0B4J1J2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv5-43A0A0B4J1J2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms