Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbv5A0A0B4J1G9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv5A0A0B4J1G9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv5A0A0B4J1G9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv5A0A0B4J1G9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv5A0A0B4J1G9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.33□□□□□ -0.11
Trbv5A0A0B4J1G9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv5A0A0B4J1G9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Rps24-207ENSMUST00000224568 714 ntBASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Haglr-201ENSMUST00000100000 2085 ntBASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv5A0A0B4J1G9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms