Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-5A0A075B6B9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Mir7075-201ENSMUST00000184187 82 ntBASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm9847-201ENSMUST00000052528 599 ntBASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-5A0A075B6B9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-5A0A075B6B9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-5A0A075B6B9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Gm8493-201ENSMUST00000196881 489 ntBASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6d-5A0A075B6B9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav6d-5A0A075B6B9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms