Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.79□□□□□ -0.2
Trav16A0A075B653 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav16A0A075B653 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav16A0A075B653 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav16A0A075B653 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.78□□□□□ -0.2
Trav16A0A075B653 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.78□□□□□ -0.2
Trav16A0A075B653 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav16A0A075B653 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav16A0A075B653 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav16A0A075B653 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav16A0A075B653 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav16A0A075B653 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.76□□□□□ -0.21
Trav16A0A075B653 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.76□□□□□ -0.21
Trav16A0A075B653 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav16A0A075B653 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav16A0A075B653 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav16A0A075B653 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav16A0A075B653 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms