Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col2a1P28481 Gm25537-201ENSMUST00000103851 109 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Gm7206-201ENSMUST00000117730 508 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Mir5103-201ENSMUST00000175111 79 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.17□□□□□ -1.42
Col2a1P28481 Gm27543-201ENSMUST00000183562 177 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Gm17775-201ENSMUST00000198542 258 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.17□□□□□ -1.42
Col2a1P28481 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.17□□□□□ -1.42
Col2a1P28481 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.17□□□□□ -1.42
Col2a1P28481 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Mir31-201ENSMUST00000083474 106 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col2a1P28481 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col2a1P28481 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col2a1P28481 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.17□□□□□ -1.42
Col2a1P28481 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col2a1P28481 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Col2a1P28481 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col2a1P28481 Gm24235-201ENSMUST00000104319 129 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Gm25383-201ENSMUST00000157810 144 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Mir7056-201ENSMUST00000183776 59 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Gm27781-201ENSMUST00000185185 92 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC6.16□□□□□ -1.42
Col2a1P28481 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC6.16□□□□□ -1.42
Col2a1P28481 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Gm18924-201ENSMUST00000211929 316 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Col2a1P28481 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col2a1P28481 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col2a1P28481 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col2a1P28481 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Col2a1P28481 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col2a1P28481 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.16□□□□□ -1.42
Col2a1P28481 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col2a1P28481 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.15□□□□□ -1.42
Col2a1P28481 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.15□□□□□ -1.42
Col2a1P28481 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.15□□□□□ -1.42
Col2a1P28481 Gm22725-201ENSMUST00000158092 110 ntBASIC6.15□□□□□ -1.42
Col2a1P28481 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.15□□□□□ -1.42
Col2a1P28481 Gm7721-201ENSMUST00000200446 546 ntBASIC6.15□□□□□ -1.42
Col2a1P28481 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.15□□□□□ -1.42
Col2a1P28481 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.15□□□□□ -1.42
Col2a1P28481 AC154239.1-201ENSMUST00000228565 406 ntBASIC6.15□□□□□ -1.42
Col2a1P28481 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.15□□□□□ -1.42
Col2a1P28481 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.15□□□□□ -1.42
Col2a1P28481 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col2a1P28481 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col2a1P28481 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms