Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Mir466n-201ENSMUST00000104798 94 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm13141-201ENSMUST00000117417 456 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Zfp389-201ENSMUST00000118425 675 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm14269-201ENSMUST00000120455 306 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm15349-201ENSMUST00000121154 204 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm14515-201ENSMUST00000121327 216 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm9785-202ENSMUST00000144563 593 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Dlx6os1-204ENSMUST00000184182 146 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm42999-201ENSMUST00000198049 786 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm18113-201ENSMUST00000220630 303 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm24036-201ENSMUST00000082868 156 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Mir296-201ENSMUST00000083587 79 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm3665-201ENSMUST00000177214 2461 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm14711-201ENSMUST00000117056 217 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm14995-201ENSMUST00000117135 391 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm12005-201ENSMUST00000121451 379 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Mir1900-201ENSMUST00000122714 78 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm9593-201ENSMUST00000166034 469 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm22642-201ENSMUST00000175352 252 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm28507-201ENSMUST00000189737 703 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm29605-201ENSMUST00000190800 292 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm43033-201ENSMUST00000199682 425 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm18805-201ENSMUST00000206872 655 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm8264-201ENSMUST00000217801 465 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 AC116589.7-201ENSMUST00000221061 239 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 AC164117.1-201ENSMUST00000221726 239 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm7252-201ENSMUST00000223284 456 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 AC124524.2-201ENSMUST00000223940 588 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gm10062-201ENSMUST00000072180 1470 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Mir7b-201ENSMUST00000083557 111 ntBASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim47Q8C0E3 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Trim47Q8C0E3 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Trim47Q8C0E3 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
Trim47Q8C0E3 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim47Q8C0E3 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim47Q8C0E3 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim47Q8C0E3 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms