Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm19921-201ENSMUST00000210505 703 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm3912-203ENSMUST00000211024 367 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Scn1bP97952 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm6419-201ENSMUST00000097166 429 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Scn1bP97952 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Scn1bP97952 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Scn1bP97952 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm26289-201ENSMUST00000104169 131 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm12939-201ENSMUST00000117303 165 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm11270-201ENSMUST00000117685 471 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm7058-201ENSMUST00000119209 902 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm10087-201ENSMUST00000167650 330 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Scn1bP97952 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm26993-201ENSMUST00000182766 789 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm17790-201ENSMUST00000191545 1228 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm17952-201ENSMUST00000193914 747 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm37883-201ENSMUST00000194970 725 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm9317-201ENSMUST00000197055 862 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm7166-201ENSMUST00000199715 303 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm44845-201ENSMUST00000208773 335 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.2□□□□□ -1.58
Scn1bP97952 AV026068-237ENSMUST00000226075 572 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm8412-201ENSMUST00000077493 440 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Scn1bP97952 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm10794-201ENSMUST00000099624 207 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.2□□□□□ -1.58
Scn1bP97952 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scn1bP97952 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn1bP97952 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms