Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm37283-201ENSMUST00000193111 1571 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm13092-201ENSMUST00000136346 260 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm28314-201ENSMUST00000191276 345 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm44441-201ENSMUST00000203642 2475 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm13137-201ENSMUST00000118035 345 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Mir6408-201ENSMUST00000183643 91 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Mir6914-201ENSMUST00000184999 69 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm43039-201ENSMUST00000202883 963 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm15206-201ENSMUST00000119143 454 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm13363-201ENSMUST00000122008 522 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm17081-201ENSMUST00000167363 478 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm30280-201ENSMUST00000192214 262 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm8774-201ENSMUST00000203621 692 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms