Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm10410-201ENSMUST00000180138 384 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm26898-201ENSMUST00000181678 384 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm37771-201ENSMUST00000193121 265 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Ighv1-41-201ENSMUST00000194414 329 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm20926-201ENSMUST00000194457 696 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm43033-201ENSMUST00000199682 425 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm2602-201ENSMUST00000202112 571 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 AC153541.1-201ENSMUST00000213786 294 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm18252-203ENSMUST00000215855 757 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 AC116465.1-201ENSMUST00000220324 235 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 AC130823.2-201ENSMUST00000226169 290 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Cma2-202ENSMUST00000228263 857 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Mir16-2-201ENSMUST00000083672 95 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm43059-201ENSMUST00000202437 1388 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm37936-201ENSMUST00000194647 1322 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm7058-201ENSMUST00000119209 902 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm13207-201ENSMUST00000119862 773 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm12229-201ENSMUST00000120487 468 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm12041-201ENSMUST00000121606 602 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Mir1960-201ENSMUST00000157488 78 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm3091-201ENSMUST00000163408 484 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm37135-201ENSMUST00000192652 534 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm18150-201ENSMUST00000195341 645 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm7946-201ENSMUST00000203326 958 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm45034-201ENSMUST00000206831 482 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm45474-201ENSMUST00000209471 408 ntBASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ndc1Q8VCB1 Gm5055-201ENSMUST00000215697 581 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms