Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm43613-201ENSMUST00000199409 1613 ntBASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm43537-201ENSMUST00000199064 3110 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm45872-201ENSMUST00000209804 1584 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm11363-201ENSMUST00000121672 548 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Mir1264-201ENSMUST00000175381 86 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm29534-201ENSMUST00000187328 382 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm28507-201ENSMUST00000189737 703 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm43392-201ENSMUST00000196560 434 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm5660-201ENSMUST00000197453 1149 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm43510-201ENSMUST00000197922 353 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm43212-201ENSMUST00000198208 394 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm43141-201ENSMUST00000199695 274 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm24460-201ENSMUST00000082731 106 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm26108-201ENSMUST00000083973 191 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm43128-201ENSMUST00000202212 1621 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm45407-201ENSMUST00000209499 3676 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Tcf24-201ENSMUST00000097824 2639 ntBASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim41Q5NCC3 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 AC139350.2-201ENSMUST00000226508 2331 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm14852-201ENSMUST00000120065 647 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm11522-201ENSMUST00000120533 176 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm13237-201ENSMUST00000122151 635 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm24847-201ENSMUST00000158032 108 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm24939-201ENSMUST00000158325 137 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm29470-201ENSMUST00000188007 696 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm9504-201ENSMUST00000196322 468 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm43675-201ENSMUST00000199468 1184 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm20734-201ENSMUST00000216939 193 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gm18557-201ENSMUST00000218710 433 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Mir135a-1-201ENSMUST00000083473 90 ntBASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim41Q5NCC3 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 AC129208.1-201ENSMUST00000227474 2906 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm43328-201ENSMUST00000198544 1434 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 CT010514.1-201ENSMUST00000214088 2969 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms