Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Scn1bP97952 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1bP97952 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1bP97952 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.23□□□□□ -1.57
Scn1bP97952 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.23□□□□□ -1.57
Scn1bP97952 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.23□□□□□ -1.57
Scn1bP97952 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1bP97952 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1bP97952 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn1bP97952 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm26340-201ENSMUST00000102365 99 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm13835-201ENSMUST00000118459 685 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm7746-201ENSMUST00000120966 503 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Gm7494-201ENSMUST00000121248 441 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Gm13363-201ENSMUST00000122008 522 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Scn1bP97952 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.22□□□□□ -1.57
Scn1bP97952 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm18407-201ENSMUST00000192126 790 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm35013-201ENSMUST00000197218 832 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm45473-201ENSMUST00000211452 616 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Scn1bP97952 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Scn1bP97952 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.22□□□□□ -1.57
Scn1bP97952 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Scn1bP97952 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn1bP97952 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn1bP97952 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Scn1bP97952 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Scn1bP97952 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Scn1bP97952 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.21□□□□□ -1.57
Scn1bP97952 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm7927-201ENSMUST00000118818 880 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm12281-201ENSMUST00000119536 298 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm12101-201ENSMUST00000121590 390 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm23964-201ENSMUST00000157966 107 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm23855-201ENSMUST00000158377 135 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm6541-201ENSMUST00000165542 561 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm4831-201ENSMUST00000174626 594 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.21□□□□□ -1.58
Scn1bP97952 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm21839-201ENSMUST00000179536 378 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm9556-201ENSMUST00000182938 940 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm38040-201ENSMUST00000193505 225 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm37774-201ENSMUST00000194401 245 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm43295-201ENSMUST00000201439 412 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm19764-201ENSMUST00000203630 649 ntBASIC5.21□□□□□ -1.58
Scn1bP97952 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Scn1bP97952 Gm45072-201ENSMUST00000208673 929 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms