Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NcanP55066 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NcanP55066 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.1□□□□□ -1.43
NcanP55066 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.1□□□□□ -1.43
NcanP55066 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Gm37143-201ENSMUST00000195180 3259 ntBASIC6.1□□□□□ -1.43
NcanP55066 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NcanP55066 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NcanP55066 Gm15074-201ENSMUST00000117603 936 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm11990-201ENSMUST00000121505 897 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm21990-201ENSMUST00000124692 383 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm22870-201ENSMUST00000157501 112 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm25665-201ENSMUST00000157695 110 ntBASIC6.1□□□□□ -1.43
NcanP55066 Mir6391-201ENSMUST00000184391 104 ntBASIC6.1□□□□□ -1.43
NcanP55066 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
NcanP55066 Gm9057-201ENSMUST00000198791 296 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.1□□□□□ -1.43
NcanP55066 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.1□□□□□ -1.43
NcanP55066 AC137961.1-201ENSMUST00000227924 734 ntBASIC6.1□□□□□ -1.43
NcanP55066 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NcanP55066 Gm10705-201ENSMUST00000098980 461 ntBASIC6.1□□□□□ -1.43
NcanP55066 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.1□□□□□ -1.43
NcanP55066 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.1□□□□□ -1.43
NcanP55066 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NcanP55066 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
NcanP55066 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.1□□□□□ -1.43
NcanP55066 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.1□□□□□ -1.43
NcanP55066 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.1□□□□□ -1.43
NcanP55066 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.1□□□□□ -1.43
NcanP55066 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.1□□□□□ -1.43
NcanP55066 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
NcanP55066 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.09□□□□□ -1.43
NcanP55066 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.09□□□□□ -1.43
NcanP55066 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.09□□□□□ -1.43
NcanP55066 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NcanP55066 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
NcanP55066 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NcanP55066 Gm24935-201ENSMUST00000103770 110 ntBASIC6.09□□□□□ -1.43
NcanP55066 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
NcanP55066 Gm12732-201ENSMUST00000121688 180 ntBASIC6.09□□□□□ -1.43
NcanP55066 Gm13149-201ENSMUST00000122071 339 ntBASIC6.09□□□□□ -1.43
NcanP55066 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.09□□□□□ -1.43
NcanP55066 Gm16345-201ENSMUST00000146065 158 ntBASIC6.09□□□□□ -1.43
NcanP55066 Gm23023-201ENSMUST00000158767 109 ntBASIC6.09□□□□□ -1.43
NcanP55066 Gm15812-201ENSMUST00000162331 748 ntBASIC6.09□□□□□ -1.43
NcanP55066 Gm27896-201ENSMUST00000175162 317 ntBASIC6.09□□□□□ -1.43
NcanP55066 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NcanP55066 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.09□□□□□ -1.43
NcanP55066 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NcanP55066 Gm44673-201ENSMUST00000205692 996 ntBASIC6.09□□□□□ -1.43
NcanP55066 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.09□□□□□ -1.43
NcanP55066 Gm18628-201ENSMUST00000220584 475 ntBASIC6.09□□□□□ -1.43
NcanP55066 AC155266.1-201ENSMUST00000220762 904 ntBASIC6.09□□□□□ -1.43
NcanP55066 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.09□□□□□ -1.43
NcanP55066 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.09□□□□□ -1.43
NcanP55066 Gm7887-201ENSMUST00000056948 537 ntBASIC6.09□□□□□ -1.43
NcanP55066 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
NcanP55066 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NcanP55066 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.09□□□□□ -1.43
NcanP55066 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NcanP55066 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NcanP55066 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
NcanP55066 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.09□□□□□ -1.44
NcanP55066 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
NcanP55066 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
NcanP55066 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
NcanP55066 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NcanP55066 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.09□□□□□ -1.44
NcanP55066 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NcanP55066 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.08□□□□□ -1.44
NcanP55066 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NcanP55066 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NcanP55066 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
NcanP55066 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms