Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm33191-201ENSMUST00000195604 699 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm43018-201ENSMUST00000198075 1275 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm7392-201ENSMUST00000217815 345 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 AC174776.1-201ENSMUST00000221509 405 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 AC154552.4-201ENSMUST00000222171 151 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 AC174776.2-201ENSMUST00000222561 405 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm24460-201ENSMUST00000082731 106 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm44220-201ENSMUST00000203784 2487 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.25□□□□□ -1.25
Pcdhb7Q8CDY9 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm13340-201ENSMUST00000117219 1545 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm23484-201ENSMUST00000104178 131 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm6490-201ENSMUST00000111862 461 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm14050-201ENSMUST00000117052 346 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm15399-201ENSMUST00000118055 724 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm14901-201ENSMUST00000119001 283 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm12710-201ENSMUST00000119011 216 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm12219-201ENSMUST00000119198 443 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm12297-201ENSMUST00000121380 979 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm13282-201ENSMUST00000121577 545 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm13409-201ENSMUST00000122072 546 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Mup-ps2-201ENSMUST00000142602 533 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm23079-201ENSMUST00000157847 117 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm25874-201ENSMUST00000178030 79 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm9457-201ENSMUST00000180176 372 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm28008-201ENSMUST00000184021 186 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm18699-201ENSMUST00000190713 243 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm44149-201ENSMUST00000204256 226 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm18838-201ENSMUST00000204855 886 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm18469-201ENSMUST00000208850 439 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm18562-201ENSMUST00000209949 915 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm45782-201ENSMUST00000212670 366 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 AC153924.1-201ENSMUST00000220117 312 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 AL671874.1-201ENSMUST00000223746 1123 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Olfr519-201ENSMUST00000084752 960 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Pcdhb7Q8CDY9 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms