Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm23839-201ENSMUST00000116957 109 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm12641-201ENSMUST00000117874 985 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm4832-201ENSMUST00000182679 399 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm19029-201ENSMUST00000189923 564 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm9173-201ENSMUST00000198054 400 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Mir409-201ENSMUST00000198153 79 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm43408-201ENSMUST00000198263 440 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm44259-201ENSMUST00000204996 298 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.53□□□□□ -1.36
Col1a1P11087 AC165260.4-201ENSMUST00000225924 724 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.53□□□□□ -1.36
Col1a1P11087 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col1a1P11087 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Col1a1P11087 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Col1a1P11087 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col1a1P11087 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Col1a1P11087 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Col1a1P11087 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col1a1P11087 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.52□□□□□ -1.37
Col1a1P11087 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col1a1P11087 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col1a1P11087 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col1a1P11087 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col1a1P11087 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.52□□□□□ -1.37
Col1a1P11087 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col1a1P11087 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm25537-201ENSMUST00000103851 109 ntBASIC6.52□□□□□ -1.37
Col1a1P11087 Gm23274-201ENSMUST00000104056 130 ntBASIC6.52□□□□□ -1.37
Col1a1P11087 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.52□□□□□ -1.37
Col1a1P11087 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.52□□□□□ -1.37
Col1a1P11087 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm44281-201ENSMUST00000203090 166 ntBASIC6.52□□□□□ -1.37
Col1a1P11087 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.52□□□□□ -1.37
Col1a1P11087 Gm2099-201ENSMUST00000220979 412 ntBASIC6.52□□□□□ -1.37
Col1a1P11087 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.52□□□□□ -1.37
Col1a1P11087 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col1a1P11087 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.52□□□□□ -1.37
Col1a1P11087 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col1a1P11087 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col1a1P11087 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Col1a1P11087 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.52□□□□□ -1.37
Col1a1P11087 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col1a1P11087 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Col1a1P11087 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col1a1P11087 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Col1a1P11087 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Col1a1P11087 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col1a1P11087 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Gm15400-201ENSMUST00000118944 601 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Gm25291-201ENSMUST00000122795 144 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Mir1945-201ENSMUST00000157919 78 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Gm17223-201ENSMUST00000171413 481 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Gm42542-201ENSMUST00000197978 268 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Gm34224-201ENSMUST00000204606 364 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Gm19936-201ENSMUST00000216414 838 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Gm23626-201ENSMUST00000082458 133 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.51□□□□□ -1.37
Col1a1P11087 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col1a1P11087 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
Col1a1P11087 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.51□□□□□ -1.37
Col1a1P11087 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.51□□□□□ -1.37
Col1a1P11087 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Col1a1P11087 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col1a1P11087 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.51□□□□□ -1.37
Col1a1P11087 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms