Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 THBS3-203ENST00000457183 2727 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 AC020658.3-201ENST00000568093 4028 ntBASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 MITF-209ENST00000448226 2489 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 SP100-206ENST00000409897 2037 ntTSL 2 BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
NPIPA3F8WFD2 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 HNRNPKP2-201ENST00000447355 1390 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 IL5RA-210ENST00000456302 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC091304.1-201ENST00000564897 3034 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 ZSCAN32-212ENST00000574940 2180 ntTSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 FP565260.7-201ENST00000623998 3634 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 SP2-AS1-201ENST00000411573 1738 ntTSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AL024509.1-201ENST00000397093 927 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 LINC02271-201ENST00000398777 546 ntTSL 4 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 SCIMP-201ENST00000399600 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 GULP1-205ENST00000409805 983 ntTSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 ZRANB2-AS2-202ENST00000413421 826 ntTSL 3 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 RPL17P10-201ENST00000416091 555 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 GCNT1P1-201ENST00000416567 1295 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 HSPB1P1-201ENST00000423240 256 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC010967.3-201ENST00000438648 213 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC092803.1-201ENST00000439570 359 ntTSL 3 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC093270.1-201ENST00000482584 486 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC130651.1-201ENST00000482912 598 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC092807.3-202ENST00000498304 508 ntTSL 3 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC136443.2-201ENST00000528546 258 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC087863.1-201ENST00000544515 570 ntTSL 4 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC136619.1-201ENST00000564015 258 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AP006565.1-201ENST00000581117 586 ntTSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AC243960.1-201ENST00000595649 661 ntTSL 5 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AL356458.1-201ENST00000604764 465 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 AL662797.3-201ENST00000607476 773 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 MIR6083-201ENST00000612737 106 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 CCL4L2-211ENST00000613173 741 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 Metazoa_SRP.62-201ENST00000619972 268 ntBASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 LAMTOR5-AS1-246ENST00000630298 858 ntTSL 5 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 KCNJ15-208ENST00000398938 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NPIPA3F8WFD2 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 HLF-208ENST00000573945 2977 ntTSL 5 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 AC005154.1-215ENST00000584621 2437 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 TRIM53AP-201ENST00000532014 1544 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 ZNF30-201ENST00000303586 2579 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 AL590004.4-201ENST00000566733 7060 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 ATXN7L1-201ENST00000318724 1470 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 RN7SKP72-201ENST00000362327 292 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 COX7A2-202ENST00000370089 773 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 CEBPZOS-201ENST00000392061 695 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 GAPDHP72-201ENST00000402643 1010 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 AC006455.7-201ENST00000422502 392 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 UBE2E1-203ENST00000424381 1224 ntTSL 2 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 OR9I2P-201ENST00000427941 903 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 OR13D2P-201ENST00000430667 907 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 MICC-201ENST00000445710 1055 ntBASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 AC098613.1-201ENST00000451485 656 ntTSL 3 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 THAP6-211ENST00000507885 896 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 AC114324.2-201ENST00000510435 680 ntTSL 3 BASIC8.34□□□□□ -1.07
NPIPA3F8WFD2 TUBB4BP5-201ENST00000512282 427 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms