Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
Upf3bQ3ULL6 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Upf3bQ3ULL6 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Upf3bQ3ULL6 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Upf3bQ3ULL6 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm24265-201ENSMUST00000101833 141 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm25152-201ENSMUST00000157117 114 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm23669-201ENSMUST00000157470 128 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm23539-201ENSMUST00000157537 224 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm22916-201ENSMUST00000157616 119 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm23774-201ENSMUST00000158990 131 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm22122-201ENSMUST00000175147 200 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm23872-201ENSMUST00000175432 77 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm24407-201ENSMUST00000177864 141 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm26970-201ENSMUST00000182990 964 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm21654-201ENSMUST00000188086 691 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm8419-201ENSMUST00000189886 412 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm38185-201ENSMUST00000193195 694 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upf3bQ3ULL6 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm27037-201ENSMUST00000182270 960 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm37581-201ENSMUST00000192371 988 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm44580-201ENSMUST00000206333 877 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm19174-201ENSMUST00000216944 956 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upf3bQ3ULL6 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Mir546-201ENSMUST00000102105 121 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms