Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm42658-201ENSMUST00000197199 1575 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LtbrP50284 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm9059-201ENSMUST00000118319 183 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Gm9308-201ENSMUST00000119073 448 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Gm16056-201ENSMUST00000119293 135 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm24901-201ENSMUST00000158125 110 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Gm24545-201ENSMUST00000158651 85 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Gm16290-201ENSMUST00000161175 474 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
LtbrP50284 Gm24824-201ENSMUST00000175097 78 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC8.49□□□□□ -1.05
LtbrP50284 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC8.49□□□□□ -1.05
LtbrP50284 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC8.49□□□□□ -1.05
LtbrP50284 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Gm6510-201ENSMUST00000195916 574 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Gm43656-201ENSMUST00000197882 434 ntBASIC8.49□□□□□ -1.05
LtbrP50284 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm43762-201ENSMUST00000201521 295 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LtbrP50284 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.49□□□□□ -1.05
LtbrP50284 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 AC147240.1-201ENSMUST00000218767 431 ntBASIC8.49□□□□□ -1.05
LtbrP50284 AC161252.2-201ENSMUST00000224978 374 ntBASIC8.49□□□□□ -1.05
LtbrP50284 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LtbrP50284 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC8.49□□□□□ -1.05
LtbrP50284 Gm23851-201ENSMUST00000083831 103 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
LtbrP50284 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
LtbrP50284 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
LtbrP50284 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm15182-201ENSMUST00000120832 1676 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Gm43788-201ENSMUST00000201539 2417 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LtbrP50284 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.49□□□□□ -1.05
LtbrP50284 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC8.48□□□□□ -1.05
LtbrP50284 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
LtbrP50284 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
LtbrP50284 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
LtbrP50284 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LtbrP50284 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.48□□□□□ -1.05
LtbrP50284 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
LtbrP50284 Gm5166-201ENSMUST00000121332 573 ntBASIC8.48□□□□□ -1.05
LtbrP50284 Gm12267-201ENSMUST00000121609 761 ntBASIC8.48□□□□□ -1.05
LtbrP50284 Gm14162-201ENSMUST00000121985 601 ntBASIC8.48□□□□□ -1.05
LtbrP50284 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.48□□□□□ -1.05
LtbrP50284 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.48□□□□□ -1.05
LtbrP50284 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.48□□□□□ -1.05
LtbrP50284 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.48□□□□□ -1.05
LtbrP50284 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.48□□□□□ -1.05
LtbrP50284 Gm24343-201ENSMUST00000158708 111 ntBASIC8.48□□□□□ -1.05
LtbrP50284 Gm24737-201ENSMUST00000158861 100 ntBASIC8.48□□□□□ -1.05
LtbrP50284 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
LtbrP50284 Gm9006-201ENSMUST00000165520 841 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms