Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
P04436 POTEKP-201ENST00000397487 2688 ntBASIC8.34□□□□□ -1.07
P04436 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC8.34□□□□□ -1.07
P04436 CBFA2T2-210ENST00000543126 3502 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 MYEF2-216ENST00000616409 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC8.34□□□□□ -1.07
P04436 MAPK10-361ENST00000641862 2462 ntBASIC8.34□□□□□ -1.07
P04436 KCND1-202ENST00000376477 3306 ntTSL 2 BASIC8.34□□□□□ -1.07
P04436 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
P04436 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 AL022318.4-201ENST00000381568 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 KRTAP9-1-201ENST00000398470 753 ntBASIC8.34□□□□□ -1.07
P04436 Z97987.1-202ENST00000411708 391 ntTSL 3 BASIC8.34□□□□□ -1.07
P04436 Z98751.1-201ENST00000413827 381 ntBASIC8.34□□□□□ -1.07
P04436 RPSAP21-201ENST00000414293 885 ntBASIC8.34□□□□□ -1.07
P04436 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC8.34□□□□□ -1.07
P04436 AL450384.2-201ENST00000425669 1028 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 TRIM26BP-206ENST00000427723 753 ntBASIC8.34□□□□□ -1.07
P04436 AP000266.1-201ENST00000450936 582 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 RPL12P37-201ENST00000486874 495 ntBASIC8.34□□□□□ -1.07
P04436 TDGF1P3-201ENST00000493351 567 ntBASIC8.34□□□□□ -1.07
P04436 ADAM20P3-201ENST00000508710 2106 ntBASIC8.34□□□□□ -1.07
P04436 AC055753.1-201ENST00000510575 889 ntBASIC8.34□□□□□ -1.07
P04436 AC124290.2-201ENST00000519431 286 ntBASIC8.34□□□□□ -1.07
P04436 OR5BB1P-201ENST00000528843 939 ntBASIC8.34□□□□□ -1.07
P04436 AC087521.2-203ENST00000530450 593 ntTSL 4 BASIC8.34□□□□□ -1.07
P04436 PROSER3-207ENST00000537459 772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC8.34□□□□□ -1.07
P04436 LINC01579-201ENST00000553818 561 ntTSL 4 BASIC8.34□□□□□ -1.07
P04436 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC8.34□□□□□ -1.07
P04436 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 AL022318.2-201ENST00000558766 258 ntBASIC8.34□□□□□ -1.07
P04436 AC018554.2-201ENST00000563482 261 ntBASIC8.34□□□□□ -1.07
P04436 CDRT7-201ENST00000568256 767 ntTSL 3 BASIC8.34□□□□□ -1.07
P04436 E2F3P1-201ENST00000589887 1230 ntBASIC8.34□□□□□ -1.07
P04436 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC8.34□□□□□ -1.07
P04436 RN7SKP290-201ENST00000606842 195 ntBASIC8.34□□□□□ -1.07
P04436 MIR6892-201ENST00000612346 115 ntBASIC8.34□□□□□ -1.07
P04436 SPDYE20P-201ENST00000616891 632 ntBASIC8.34□□□□□ -1.07
P04436 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
P04436 SLC7A7-215ENST00000555702 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
P04436 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
P04436 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 NOL10-202ENST00000381685 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 KIAA1328-203ENST00000586501 1577 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 PLCD4-203ENST00000432688 3225 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
P04436 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC8.34□□□□□ -1.07
P04436 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.34□□□□□ -1.07
P04436 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
P04436 TGFB2-OT1-201ENST00000625474 1371 ntBASIC8.34□□□□□ -1.07
P04436 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
P04436 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 CFL1P1-203ENST00000438248 2120 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
P04436 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
P04436 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC8.33□□□□□ -1.08
P04436 CAMK2D-208ENST00000508738 1470 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC8.33□□□□□ -1.08
P04436 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 AP002991.2-201ENST00000623807 2801 ntBASIC8.33□□□□□ -1.08
P04436 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 BLNK-202ENST00000371176 1715 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 AL590617.1-201ENST00000405630 748 ntBASIC8.33□□□□□ -1.08
P04436 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
P04436 AP000459.1-201ENST00000433101 861 ntTSL 3 BASIC8.33□□□□□ -1.08
P04436 AL109810.1-201ENST00000435008 495 ntBASIC8.33□□□□□ -1.08
P04436 PMS2P10-201ENST00000447708 612 ntBASIC8.33□□□□□ -1.08
P04436 AL662789.1-201ENST00000448198 724 ntTSL 2 BASIC8.33□□□□□ -1.08
P04436 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC8.33□□□□□ -1.08
P04436 SLC25A15P2-201ENST00000457292 338 ntBASIC8.33□□□□□ -1.08
P04436 CENPS-202ENST00000462462 584 ntTSL 3 BASIC8.33□□□□□ -1.08
P04436 RPL12P42-201ENST00000481802 499 ntBASIC8.33□□□□□ -1.08
P04436 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 TPT1P5-201ENST00000511433 521 ntBASIC8.33□□□□□ -1.08
P04436 IGHVII-15-1-201ENST00000517931 220 ntBASIC8.33□□□□□ -1.08
P04436 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC8.33□□□□□ -1.08
P04436 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC8.33□□□□□ -1.08
P04436 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
P04436 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC8.33□□□□□ -1.08
P04436 AC089984.2-201ENST00000550293 1201 ntBASIC8.33□□□□□ -1.08
P04436 AL352977.1-201ENST00000553464 453 ntTSL 5 BASIC8.33□□□□□ -1.08
P04436 AC113146.1-201ENST00000558255 696 ntTSL 3 BASIC8.33□□□□□ -1.08
P04436 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC8.33□□□□□ -1.08
P04436 AC009139.1-201ENST00000561672 652 ntTSL 2 BASIC8.33□□□□□ -1.08
P04436 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC8.33□□□□□ -1.08
P04436 ZNF527-204ENST00000587349 999 ntTSL 3 BASIC8.33□□□□□ -1.08
P04436 AC119751.8-201ENST00000597032 156 ntBASIC8.33□□□□□ -1.08
P04436 AC022400.4-201ENST00000604613 286 ntBASIC8.33□□□□□ -1.08
P04436 AC104958.2-201ENST00000605955 1141 ntBASIC8.33□□□□□ -1.08
P04436 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC8.33□□□□□ -1.08
P04436 PHBP6-201ENST00000614021 786 ntBASIC8.33□□□□□ -1.08
P04436 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC8.33□□□□□ -1.08
P04436 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms