Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 C330002G04Rik-201ENSMUST00000181623 2054 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm23062-201ENSMUST00000102349 110 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Snord88c-201ENSMUST00000116853 90 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm12417-201ENSMUST00000119153 403 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm12231-201ENSMUST00000119447 695 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Sulf2-207ENSMUST00000146497 3808 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm4997-201ENSMUST00000154056 360 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm8580-201ENSMUST00000160295 464 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm4781-201ENSMUST00000167995 781 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm27465-201ENSMUST00000184290 91 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm27403-201ENSMUST00000184662 214 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm38135-201ENSMUST00000195068 502 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm43160-201ENSMUST00000196453 421 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm43836-201ENSMUST00000196532 381 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm23377-202ENSMUST00000196828 138 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm42634-201ENSMUST00000197362 381 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm43991-201ENSMUST00000203751 274 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm45119-201ENSMUST00000207612 199 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC8.7□□□□□ -1.02
Trim35Q8C006 AC154642.1-201ENSMUST00000224173 740 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 AC154335.2-201ENSMUST00000225916 638 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 AC140406.3-201ENSMUST00000227619 478 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Hspb3-201ENSMUST00000054650 781 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 BB014433-201ENSMUST00000050493 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Ap3b1-201ENSMUST00000022196 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Ambn-202ENSMUST00000198265 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Asph-208ENSMUST00000108334 2685 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Dgat2l6-201ENSMUST00000037541 1640 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm15533-202ENSMUST00000206216 3262 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 1700112J16Rik-201ENSMUST00000181631 2215 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Zfp949-204ENSMUST00000162827 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm8366-201ENSMUST00000118751 1769 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm8346-201ENSMUST00000178968 1769 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Scel-202ENSMUST00000227322 2443 ntAPPRIS ALT2 BASIC8.69□□□□□ -1.02
Trim35Q8C006 CT009723.1-201ENSMUST00000215057 1803 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 AC159193.1-201ENSMUST00000222872 2517 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm12774-201ENSMUST00000117881 416 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm11923-201ENSMUST00000118135 508 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm13500-201ENSMUST00000119348 824 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm13655-201ENSMUST00000119695 745 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm15574-201ENSMUST00000119937 405 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm14394-201ENSMUST00000120307 295 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm14524-201ENSMUST00000121066 683 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm12785-201ENSMUST00000122052 172 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm11197-201ENSMUST00000145158 839 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm23827-201ENSMUST00000157116 145 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm22849-201ENSMUST00000157713 307 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm22014-201ENSMUST00000158785 290 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm10075-201ENSMUST00000162030 545 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm2866-201ENSMUST00000166053 481 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm17074-201ENSMUST00000167284 556 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm8649-201ENSMUST00000181799 233 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms