Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm11196-201ENSMUST00000119052 395 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm15828-201ENSMUST00000119911 522 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC8.86□□□□□ -0.99
Col17a1Q07563 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC8.86□□□□□ -0.99
Col17a1Q07563 CT025526.1-201ENSMUST00000217327 267 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 AC153553.1-201ENSMUST00000218257 684 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm18601-201ENSMUST00000220831 634 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm23875-201ENSMUST00000083711 318 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC8.86□□□□□ -0.99
Col17a1Q07563 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Col17a1Q07563 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC8.86□□□□□ -0.99
Col17a1Q07563 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Col17a1Q07563 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Col17a1Q07563 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Col17a1Q07563 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm13566-201ENSMUST00000117428 1142 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm14753-201ENSMUST00000118503 246 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm8256-201ENSMUST00000169178 453 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm23164-201ENSMUST00000175084 111 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm8502-201ENSMUST00000185708 901 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm43744-201ENSMUST00000196387 688 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm4602-201ENSMUST00000203198 308 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC8.85□□□□□ -0.99
Col17a1Q07563 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Mir484-201ENSMUST00000093566 67 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 CT025686.2-201ENSMUST00000227898 3315 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
Col17a1Q07563 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 AC168056.3-201ENSMUST00000225395 2540 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 AC114585.1-201ENSMUST00000228080 3680 ntBASIC8.85□□□□□ -0.99
Col17a1Q07563 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Col17a1Q07563 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Col17a1Q07563 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col17a1Q07563 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col17a1Q07563 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm25096-201ENSMUST00000104043 129 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm11318-201ENSMUST00000118640 961 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm14739-201ENSMUST00000120424 802 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm23906-201ENSMUST00000157573 128 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm38280-201ENSMUST00000192610 158 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.84□□□□□ -0.99
Col17a1Q07563 AC154358.1-201ENSMUST00000224871 218 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm23796-201ENSMUST00000084011 160 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm43313-201ENSMUST00000201398 2235 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col17a1Q07563 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col17a1Q07563 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col17a1Q07563 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm9408-201ENSMUST00000197375 1505 ntBASIC8.84□□□□□ -0.99
Col17a1Q07563 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Col17a1Q07563 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col17a1Q07563 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col17a1Q07563 Gm23273-201ENSMUST00000104058 135 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Gm24982-201ENSMUST00000104456 132 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Gm15297-201ENSMUST00000117795 290 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Col17a1Q07563 Gm12372-201ENSMUST00000121654 768 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC8.83□□□□□ -1
Col17a1Q07563 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Gm29086-201ENSMUST00000186774 222 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Gm29085-201ENSMUST00000187108 225 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Gm29196-201ENSMUST00000189239 618 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Gm29138-201ENSMUST00000191444 348 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Gm6719-201ENSMUST00000202067 335 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Api5-ps-201ENSMUST00000206607 577 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Gm34272-201ENSMUST00000208886 253 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms