Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Mir1188-201ENSMUST00000116756 120 ntBASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Gm25176-201ENSMUST00000122640 125 ntBASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Gm5946-201ENSMUST00000182340 970 ntBASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Gm18940-201ENSMUST00000222518 871 ntBASIC6.22□□□□□ -1.41
Scn3aA2ASI5 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.22□□□□□ -1.41
Scn3aA2ASI5 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Scn3aA2ASI5 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Scarna6-201ENSMUST00000158656 265 ntBASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
Scn3aA2ASI5 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Gm43629-201ENSMUST00000201782 704 ntBASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Gm45700-201ENSMUST00000205866 347 ntBASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.21□□□□□ -1.41
Scn3aA2ASI5 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Gm15838-201ENSMUST00000161575 180 ntBASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Mir3090-201ENSMUST00000175597 87 ntBASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Mir6343-201ENSMUST00000183584 84 ntBASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Gm29596-201ENSMUST00000185710 385 ntBASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Gm21041-201ENSMUST00000214829 823 ntBASIC6.21□□□□□ -1.42
Scn3aA2ASI5 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scn3aA2ASI5 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm13488-201ENSMUST00000120419 179 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm11805-201ENSMUST00000121238 600 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm3242-201ENSMUST00000171273 485 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm21241-201ENSMUST00000179551 934 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm28061-201ENSMUST00000189085 807 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm19029-201ENSMUST00000189923 564 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm20819-201ENSMUST00000191091 925 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm20871-201ENSMUST00000191322 931 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm44456-201ENSMUST00000196554 89 ntBASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn3aA2ASI5 Gm19256-201ENSMUST00000218550 231 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms