Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm5493S4R2D1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Gm7860-201ENSMUST00000121190 879 ntBASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Gm22238-201ENSMUST00000175222 88 ntBASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm5493S4R2D1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm5493S4R2D1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm5493S4R2D1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm5493S4R2D1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms