Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk1bQ9Z2C6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Gm40848-201ENSMUST00000221998 324 ntBASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1bQ9Z2C6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1bQ9Z2C6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1bQ9Z2C6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Gm26833-201ENSMUST00000180899 440 ntBASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1bQ9Z2C6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.58■□□□□ 0.25
Upk1bQ9Z2C6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Upk1bQ9Z2C6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Upk1bQ9Z2C6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
Upk1bQ9Z2C6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Gm21956-201ENSMUST00000179946 522 ntBASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1bQ9Z2C6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1bQ9Z2C6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1bQ9Z2C6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Upk1bQ9Z2C6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Upk1bQ9Z2C6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.57■□□□□ 0.24
Upk1bQ9Z2C6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1bQ9Z2C6 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms