Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ap4s1Q9WVL1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ap4s1Q9WVL1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ap4s1Q9WVL1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ap4s1Q9WVL1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Gm12251-201ENSMUST00000117893 792 ntBASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ap4s1Q9WVL1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ap4s1Q9WVL1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap4s1Q9WVL1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ap4s1Q9WVL1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Ap4s1Q9WVL1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms